Miyakogusa Predicted Gene
- Lj4g3v0060670.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SZW8_LOTJA |
298 |
93.6 |
93.6 |
(tr|I3SZW8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G02410.1 |
226 |
73.1 |
84.0 |
| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298); Has 1151 Blast hits to 1151 proteins in 597 species: Archae - 0; Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr2:632713-634613 FORWARD LENGTH=308 |
| Medicago |
Medtr4g134410.1 |
258 |
80.8 |
87.2 |
| YacP-like NYN domain protein | HC | chr4:56285094-56292434 | 20130731 |
| Soybean |
Glyma07g40130.3 |
271 |
84.0 |
89.7 |
|
| LJGI |
gnl|LJGI|TC81557 |
934 |
100.0 |
100.0 |
similar to UniRef100_A7QCF3 Cluster: Chromosome undetermined scaffold_77, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_77, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0060670.1 |
length: 156 aa. |
| IPR010298 |
Protein of unknown function DUF901 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05991 |
NYN_YacP |
2.6e-32 |
3-148 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
100-121 |
| Seg |
seg |
seg |
NA |
86-95 |
- Wolf-PSORT
Lj4g3v0060670.1 cyto 5, nucl 3, cyto_plas 3, chlo 2, mito 2, chlo_mito 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0060670.1 |
|