Miyakogusa Predicted Gene

Lj4g3v0037550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L425_SOYBN 392 71.6 74.5 (tr|K7L425) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G02470.1 344 63.9 69.3 | Symbols: AL6 | alfin-like 6 | chr2:652837-654621 FORWARD LENGTH=256
Medicago Medtr4g134510.1 370 67.9 72.5 | PHD finger alfin-like protein | HC | chr4:56329915-56334966 | 20130731
Soybean Glyma07g40170.1 392 71.6 74.5  
LJGI gnl|LJGI|TC81410 424 99.5 99.5 homologue to UniRef100_Q06A75 Cluster: PHD5; n=1; Glycine max|Rep: PHD5 - Glycine max (Soybean), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0037550.1 length: 275 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 1.3e-10 221-269
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 1.6e-16 209-275
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.4e-16 215-271
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 222-268
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 4.1e-10 222-270
ProfileScan PS50016 ZF_PHD_2 9.597 219-271
IPR021998 Protein of unknown function DUF3594
HMMPfam PF12165 DUF3594 1.4e-68 10-32
54-168
no_ID  
HMMPanther PTHR12321 CPG 3e-150 9-271
HMMPanther PTHR12321:SF12 SUBFAMILY 3e-150 9-271
Seg seg seg NA 34-49
83-100
205-217
Wolf-PSORT
Lj4g3v0037550.1	cyto 5, mito 5, chlo 2, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0037550.1