Miyakogusa Predicted Gene

Lj4g3v0014220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9N0I9_POPTR 517 55.3 65.3 (tr|B9N0I9) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_297302 PE=4 SV=1
TAIR_pep AT5G53350.1 435 61.4 73.2 | Symbols: CLPX | CLP protease regulatory subunit X | chr5:21644060-21647503 FORWARD LENGTH=579
Medicago Medtr6g059910.1 416 62.6 73.3 | ATP-dependent Clp protease regulatory subunit ClpX | HC | chr6:20566263-20573202 | 20130731
Soybean Glyma09g28260.1 456 64.5 74.7  
LJGI gnl|LJGI|TC82758 605 100.0 100.0 similar to UniRef100_Q9LTA9 Cluster: CLP protease regulatory subunit CLPX-like; n=1; Arabidopsis thaliana|Rep: CLP protease regulatory subunit CLPX-like - Arabidopsis thaliana (Mouse-ear cress), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0014220.1 length: 526 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.6e-09 234-370
IPR004487 Clp protease, ATP-binding subunit ClpX
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11262:SF4 ATP-DEPENDENT 4.3e-175 16-498
IPR013093 ATPase, AAA-2
Molecular Function GO:0005524 ATP binding    
HMMPfam PF07724 AAA_2 1.8e-36 234-421
IPR019489 Clp ATPase, C-terminal
HMMPfam PF10431 ClpB_D2-small 1.3e-09 435-483
HMMSmart SM01086 C-terminal, 9.3e-06 428-496
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.9e-49 173-502
no_ID  
Gene3D G3DSA:1.10.8.60 no description 2.7e-16 443-497
Gene3D G3DSA:3.40.50.300 no description 2.7e-40 410-442
HMMPanther PTHR11262 HSL 4.3e-175 16-498
Seg seg seg NA 1-11
67-79
155-182
Wolf-PSORT
Lj4g3v0014220.1	chlo 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0014220.1