Miyakogusa Predicted Gene

Lj4g3v0001110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9SPD4_RICCO 356 73.9 85.0 (tr|B9SPD4) Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=1
TAIR_pep AT1G10310.1 332 71.2 82.3 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr1:3381733-3383874 REVERSE LENGTH=242
Medicago Medtr4g134660.1 355 76.6 84.8 | enoyl-(acyl carrier) reductase | HC | chr4:56436407-56438044 | 20130731
Soybean Glyma03g00880.1 347 72.6 84.6  
LJGI gnl|LJGI|GO026226 611 99.4 99.4 similar to UniRef100_A7QCC5 Cluster: Chromosome undetermined scaffold_77, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_77, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0001110.1 length: 237 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00080 SDRFAMILY 6.1e-09 87-98
141-149
161-180
HMMPfam PF00106 adh_short 2.2e-27 14-179
IPR002347 Glucose/ribitol dehydrogenase
FPrintScan PR00081 GDHRDH 1.8e-21 13-30
87-98
135-151
161-180
181-198
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.8e-55 11-204
IPR020904 Short-chain dehydrogenase/reductase, conserved site
Molecular Function GO:0016491 oxidoreductase activity    
PatternScan PS00061 ADH_SHORT NA 148-176
no_ID  
HMMPanther PTHR24322 FAMILY 2.3e-48 1-200
Seg seg seg NA 48-61
superfamily SSF51735 NAD(P)-binding 5e-56 7-232
Wolf-PSORT
Lj4g3v0001110.1	chlo 12, nucl 1, cyto 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0001110.1