Miyakogusa Predicted Gene

Lj3g3v3755420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LNN6_SOYBN 998 81.1 85.7 (tr|I1LNN6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G72090.1 783 70.2 80.4 | Symbols: | Methylthiotransferase | chr1:27123617-27126767 FORWARD LENGTH=601
Medicago Medtr4g033210.1 985 79.3 84.0 | dimethylallyl, adenosine tRNA methylthiotransferase | HC | chr4:11569877-11575926 | 20130731
Soybean Glyma12g00350.1 998 81.1 85.7  
LJGI gnl|LJGI|TC58540 2589 99.8 99.8 similar to UniRef100_A7Q7H0 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3755420.1 length: 601 aa.
IPR002792 TRAM domain
method AccNumber shortName E-value location
ProfileScan PS50926 TRAM 10.324 411-473
IPR005839 Methylthiotransferase
Molecular Function GO:0016740 transferase activity    
Biological Process GO:0043412 macromolecule modification    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMTigr TIGR00089 TIGR00089: 9.5e-100 50-467
IPR006466 MiaB-like tRNA modifying enzyme, archaeal-type
HMMTigr TIGR01578 MiaB-like-B: 1.4e-136 51-472
IPR006638 Elongator protein 3/MiaB/NifB
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMSmart SM00729 Elongator 1.1e-39 182-406
IPR007197 Radical SAM
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMPfam PF04055 Radical_SAM 5.7e-19 190-361
IPR013848 Methylthiotransferase, N-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMPfam PF00919 UPF0004 1.1e-18 51-129
ProfileScan PS51449 MTTASE_N 28.723 49-157
IPR020612 Methylthiotransferase, conserved site
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
PatternScan PS01278 MTTASE_RADICAL NA 186-206
IPR023404 Radical SAM, alpha/beta horseshoe
Gene3D G3DSA:3.80.30.20 no description 1.3e-56 186-406
IPR023970 Methylthiotransferase/radical SAM-type protein
HMMPanther PTHR11918 RADICAL 7e-175 43-481
no_ID  
HMMPanther PTHR11918:SF41 SUBFAMILY 7e-175 43-481
Seg seg seg NA 247-264
577-592
superfamily SSF102114 Radical 1.1e-43 147-406
Wolf-PSORT
Lj3g3v3755420.1	cyto 4, plas 4, cyto_plas 4, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3755420.1