Miyakogusa Predicted Gene

Lj3g3v3751950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LFL8_SOYBN 840 76.6 86.5 (tr|K7LFL8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G25270.1 613 61.1 77.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:12937253-12938836 REVERSE LENGTH=527
Medicago Medtr3g063220.1 824 79.8 89.0 | PPR containing plant-like protein | HC | chr3:28610294-28607607 | 20130731
Soybean Glyma09g36670.1 680 65.4 73.8  
LJGI gnl|LJGI|FS341003 1134 99.8 99.8 weakly similar to UniRef100_A7Q4W7 Cluster: Chromosome undetermined scaffold_51, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_51, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3751950.1 length: 521 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.18 126-149
227-252
325-351
425-442
HMMPfam PF13041 PPR_2 3.1e-12 156-198
253-299
351-395
HMMTigr TIGR00756 PPR: 3.9e-05 156-187
255-288
325-353
353-383
ProfileScan PS51375 PPR 7.125 152-186
119-149
187-221
253-287
222-252
320-354
383-413
364-382
419-454
487-521
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2e-08 484-506
no_ID  
HMMPanther PTHR24015 FAMILY 1.4e-217 38-521
HMMPanther PTHR24015:SF104SUBFAMILY NOT 1.4e-217 38-521
Seg seg seg NA 18-31
Wolf-PSORT
Lj3g3v3751950.1	cyto 6, nucl 4, cyto_pero 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3751950.1