Miyakogusa Predicted Gene

Lj3g3v3737720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S8M3_LOTJA 416 100.0 100.0 (tr|I3S8M3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G71692.1 229 61.1 73.5 | Symbols: AGL12, XAL1 | AGAMOUS-like 12 | chr1:26952903-26954939 REVERSE LENGTH=211
Medicago Medtr4g036050.1 354 85.6 90.1 | MADS-box transcription factor | HC | chr4:12873717-12867419 | 20130731
Soybean Glyma12g00770.1 334 80.8 87.7  
LJGI gnl|LJGI|TC57369 1178 99.5 99.5 similar to UniRef100_A7PQ40 Cluster: Chromosome chr18 scaffold_24, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_24, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3737720.1 length: 200 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 2.9e-27 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 2.8e-23 10-56
HMMSmart SM00432 no description 7.5e-35 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 30.025 1-61
superfamily SSF55455 SRF-like 1.6e-27 1-85
IPR002487 Transcription factor, K-box
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 5.8e-19 82-171
ProfileScan PS51297 K_BOX 11.609 87-177
no_ID  
HMMPanther PTHR11945 MADS 8e-66 1-179
HMMPanther PTHR11945:SF19 MADS 8e-66 1-179
Wolf-PSORT
Lj3g3v3737720.1	nucl 5, mito 4, chlo 3, cyto_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3737720.1