Miyakogusa Predicted Gene

Lj3g3v3736620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L5P9_SOYBN 744 91.9 94.0 (tr|I1L5P9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G42970.1 658 81.1 88.2 | Symbols: COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4 | Proteasome component (PCI) domain protein | chr5:17237470-17240649 REVERSE LENGTH=397
Medicago Medtr0173s0030.1 740 91.7 92.9 | COP9 signalosome complex subunit-like protein | HC | scaffold0173:7389-25431 | 20130731
Soybean Glyma09g36550.1 744 91.9 94.0  
LJGI gnl|LJGI|TC70544 2359 99.9 99.9 homologue to UniRef100_A7NTF0 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3736620.1 length: 397 aa.
IPR000717 Proteasome component (PCI) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01399 PCI 3.2e-18 268-361
HMMSmart SM00088 motif 6.6e-15 294-377
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 9.8e-27 289-366
no_ID  
HMMPanther PTHR10855 26S 8.4e-175 1-391
HMMPanther PTHR10855:SF2 COP9 8.4e-175 1-391
Seg seg seg NA 210-225
superfamily SSF46785 "Winged 1.4e-20 288-371
Wolf-PSORT
Lj3g3v3736620.1	cyto 6, chlo 5, nucl 1, extr 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3736620.1