Miyakogusa Predicted Gene

Lj3g3v3724440.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L5P0_SOYBN 1488 71.8 82.5 (tr|I1L5P0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G07660.1 1123 55.2 73.3 | Symbols: SMC6A | structural maintenance of chromosomes 6A | chr5:2422839-2429912 FORWARD LENGTH=1058
Medicago Medtr4g036760.1 1502 71.8 82.2 | structural maintenance-like chromosomes-protein | HC | chr4:13404550-13426772 | 20130731
Soybean Glyma09g36430.1 1461 70.1 80.5  
LJGI gnl|LJGI|DC594563 961 99.8 99.8 similar to UniRef100_A7PBP7 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3724440.1 length: 1060 aa.
IPR003395 RecF/RecN/SMC
method AccNumber shortName E-value location
HMMPfam PF02463 SMC_N 8.8e-21 26-1055
IPR010935 SMCs flexible hinge
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005694 chromosome    
Biological Process GO:0051276 chromosome organization    
superfamily SSF75553 Smc 5.8e-09 382-651
IPR027132 Structural maintenance of chromosomes protein 6
Biological Process GO:0000724 double-strand break repair via homologous recombination    
Biological Process GO:0006281 DNA repair    
Cellular Component GO:0030915 Smc5-Smc6 complex    
HMMPanther PTHR19306:SF2 STRUCTURAL 2.3e-287 23-1059
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.5e-51 24-1054
no_ID  
Coil coil coiled-coil NA 213-254
259-315
336-421
636-685
725-760
774-795
897-918
Gene3D G3DSA:3.40.50.300 no description 5.1e-40 932-1045
HMMPanther PTHR19306 STRUCTURAL 2.3e-287 23-1059
Seg seg seg NA 9-21
126-131
648-659
697-709
Wolf-PSORT
Lj3g3v3724440.1	cyto 5, nucl 4, chlo 2, nucl_plas 2, mito 1.5, cyto_mito 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3724440.1