database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | G7IKW7_MEDTR | 902 | 77.7 | 81.9 | (tr|G7IKW7) SNW domain-containing protein OS=Medicago truncatula GN=MTR_2g030450 PE=4 SV=1 |
TAIR_pep | AT1G77180.2 | 721 | 63.0 | 72.5 | | Symbols: SKIP | chromatin protein family | chr1:28999791-29001632 REVERSE LENGTH=613 |
Medicago | Medtr2g030450.1 | 902 | 77.7 | 81.9 | | GAMYB-binding protein | HC | chr2:11456477-11453867 | 20130731 |
Soybean | Glyma01g01190.1 | 810 | 76.0 | 80.8 | |
LJGI | gnl|LJGI|TC69960 | 1570 | 99.8 | 99.8 | similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1; Glycine max|Rep: GAMYB-binding protein - Glycine max (Soybean), partial (42%) |
Lj3g3v3689900.1 | length: 603 aa. | |||
IPR004015 | SKI-interacting protein SKIP, SNW domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Biological Process | GO:0000398 | mRNA splicing, via spliceosome | ||
Cellular Component | GO:0005681 | spliceosomal complex | ||
HMMPfam | PF02731 | SKIP_SNW | 3.7e-65 | 188-347 |
IPR017862 | SKI-interacting protein, SKIP | |||
Biological Process | GO:0000398 | mRNA splicing, via spliceosome | ||
Cellular Component | GO:0005681 | spliceosomal complex | ||
HMMPanther | PTHR12096 | NUCLEAR | 1.3e-269 | 2-586 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 315-347 386-419 |
Seg | seg | seg | NA | 137-148 234-249 321-339 395-416 |
Lj3g3v3689900.1 nucl 11, cyto 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj3g3v3689900.1 |