Miyakogusa Predicted Gene

Lj3g3v3678810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LSD1_SOYBN 961 82.2 88.0 (tr|K7LSD1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G34160.1 680 58.9 72.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:12441393-12443225 FORWARD LENGTH=581
Medicago Medtr0013s0120.1 958 82.3 89.8 | pentatricopeptide (PPR) repeat protein | HC | scaffold0013:48776-47089 | 20130731
Soybean Glyma12g01230.1 868 80.4 86.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3678810.1 length: 579 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.19 244-268
275-305
310-337
347-370
HMMPfam PF13041 PPR_2 3.3e-10 171-217
HMMTigr TIGR00756 PPR: 0.00074 145-172
174-206
244-269
275-309
310-343
ProfileScan PS51375 PPR 5.996 171-205
140-170
105-139
70-104
273-307
241-271
308-342
343-373
375-409
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.7e-05 376-428
no_ID  
HMMPanther PTHR24015 FAMILY 5.1e-280 6-579
HMMPanther PTHR24015:SF9 UNKNOWN 5.1e-280 6-579
HMMPfam PF14432 DYW_deaminase 9.2e-15 457-568
Seg seg seg NA 3-14
140-150
Wolf-PSORT
Lj3g3v3678810.1	chlo 12, cyto 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3678810.1