Miyakogusa Predicted Gene

Lj3g3v3666580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q67BK3_SOYBN 175 76.5 88.7 (tr|Q67BK3) AGL15 OS=Glycine max GN=AGL15 PE=2 SV=1
TAIR_pep AT5G13790.1 144 61.7 78.3 | Symbols: AGL15 | AGAMOUS-like 15 | chr5:4449128-4450802 REVERSE LENGTH=268
Medicago Medtr0003s0590.1 184 83.2 90.3 | MADS-box transcription factor | HC | scaffold0003:334742-330784 | 20130731
Soybean Glyma02g33040.1 136 60.7 76.1  
LJGI gnl|LJGI|FS335696 361 100.0 100.0 similar to UniRef100_Q67BK3 Cluster: AGL15; n=1; Glycine max|Rep: AGL15 - Glycine max (Soybean), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3666580.1 length: 115 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 2.9e-29 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 8.3e-26 9-59
HMMSmart SM00432 no description 7.8e-41 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 32.071 1-61
superfamily SSF55455 SRF-like 4.7e-32 2-94
no_ID  
HMMPanther PTHR11945 MADS 3.3e-48 1-113
HMMPanther PTHR11945:SF19 MADS 3.3e-48 1-113
Wolf-PSORT
Lj3g3v3666580.1	nucl 10, cyto 2, chlo 1, extr 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3666580.1