Miyakogusa Predicted Gene

Lj3g3v3652410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LNZ7_SOYBN 603 73.0 75.3 (tr|I1LNZ7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G51950.2 244 56.0 64.1 | Symbols: | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | chr3:19278244-19280407 REVERSE LENGTH=540
Medicago Medtr3g436060.1 515 65.5 71.0 | RNA-binding domain CCCH-type zinc finger protein | HC | chr3:12079943-12084739 | 20130731
Soybean Glyma12g01350.2 603 73.0 75.3  
LJGI gnl|LJGI|AV422106 850 98.3 98.3 weakly similar to UniRef100_A7Q1Y9 Cluster: Chromosome chr13 scaffold_45, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_45, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3652410.1 length: 430 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 1.3e-07 91-161
ProfileScan PS50102 RRM 9.422 90-166
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.3e-08 100-172
no_ID  
HMMPanther PTHR24009 FAMILY 5.8e-145 7-430
HMMPanther PTHR24009:SF0 SUBFAMILY 5.8e-145 7-430
HMMPfam PF14259 RRM_6 2.7e-06 101-152
Seg seg seg NA 41-58
218-231
279-294
305-332
superfamily SSF54928 RNA-binding 1e-11 74-176
Wolf-PSORT
Lj3g3v3652410.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3652410.1