Miyakogusa Predicted Gene
- Lj3g3v3640170.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SJB5_LOTJA |
523 |
99.6 |
99.6 |
(tr|I3SJB5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G04940.1 |
436 |
67.4 |
76.6 |
| Symbols: | scramblase-related | chr2:1736671-1740254 REVERSE LENGTH=392 |
| Medicago |
Medtr4g077510.1 |
496 |
71.4 |
77.3 |
| scramblase-like protein | HC | chr4:29674301-29666675 | 20130731 |
| Soybean |
Glyma12g02160.1 |
509 |
75.0 |
80.4 |
|
| LJGI |
gnl|LJGI|TC75722 |
995 |
100.0 |
100.0 |
similar to UniRef100_A7PBF2 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3640170.1 |
length: 337 aa. |
| IPR005552 |
Scramblase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR23248 |
PHOSPHOLIPID |
1.1e-142 |
85-335 |
| HMMPfam |
PF03803 |
Scramblase |
4.9e-64 |
98-324 |
| no_ID |
|
| HMMPanther |
PTHR23248:SF2 |
UNCHARACTERIZED |
1.1e-142 |
85-335 |
| Seg |
seg |
seg |
NA |
59-81 |
- Wolf-PSORT
Lj3g3v3640170.1 cyto 8, chlo 2, nucl 2, mito 1, plas 1, cysk_nucl 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3640170.1 |
|