database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | K7LP50_SOYBN | 1088 | 79.2 | 86.1 | (tr|K7LP50) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT1G30610.2 | 763 | 56.9 | 75.0 | | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-containing protein | chr1:10846676-10850517 FORWARD LENGTH=978 |
Medicago | Medtr0001s0430.1 | 1101 | 77.4 | 86.0 | | pentatricopeptide (PPR) repeat protein | HC | scaffold0001:195705-188782 | 20130731 |
Soybean | Glyma11g11810.1 | 926 | 82.3 | 88.7 | |
LJGI | --No_Hits-- |
Lj3g3v3639830.1 | length: 1049 aa. | |||
IPR002885 | Pentatricopeptide repeat | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
HMMPfam | PF01535 | PPR | 0.85 | 547-573 702-731 771-798 |
HMMPfam | PF13041 | PPR_2 | 5.8e-11 | 629-673 802-861 |
HMMTigr | TIGR00756 | PPR: | 0.00028 | 632-664 702-733 805-833 852-878 |
ProfileScan | PS51375 | PPR | 9.394 | 506-536 544-574 580-610 630-664 699-733 665-695 803-833 769-799 734-768 850-884 |
IPR011990 | Tetratricopeptide-like helical | |||
Molecular Function | GO:0005515 | protein binding | ||
Gene3D | G3DSA:1.25.40.10 | no description | 1.8e-11 | 701-832 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 820-845 |
HMMPanther | PTHR24015 | FAMILY | 2.4e-68 | 475-886 |
Seg | seg | seg | NA | 63-77 218-268 272-290 318-330 353-372 984-991 |
superfamily | SSF48452 | TPR-like | 2.8e-10 | 628-843 |
Lj3g3v3639830.1 chlo 12, nucl 1, cysk 1, cysk_nucl 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj3g3v3639830.1 |