Miyakogusa Predicted Gene

Lj3g3v3639590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9S215_RICCO 567 70.8 82.9 (tr|B9S215) Protein transporter, putative OS=Ricinus communis GN=RCOM_1325470 PE=4 SV=1
TAIR_pep AT5G16880.2 483 63.1 75.3 | Symbols: | Target of Myb protein 1 | chr5:5549658-5551274 FORWARD LENGTH=407
Medicago Medtr5g007480.1 526 67.4 79.9 | protein transporter | HC | chr5:1376842-1372618 | 20130731
Soybean Glyma01g44290.1 565 71.9 81.5  
LJGI gnl|LJGI|TC62570 230 84.3 84.3 similar to UniRef100_A7P260 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3639590.1 length: 396 aa.
IPR002014 VHS
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
HMMPfam PF00790 VHS 2.3e-24 48-179
ProfileScan PS50179 VHS 36.043 55-183
IPR004152 GAT
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMPfam PF03127 GAT 3.1e-18 226-312
ProfileScan PS50909 GAT 15.170 223-310
IPR008942 ENTH/VHS
Gene3D G3DSA:1.25.40.90 no description 3e-37 41-183
superfamily SSF48464 ENTH/VHS 3.4e-37 49-183
IPR014645 Target of Myb protein 1
HMMPIR PIRSF036948 Target 1.6e-130 1-396
IPR018205 VHS subgroup
HMMSmart SM00288 Domain 8e-27 48-179
no_ID  
Gene3D G3DSA:1.20.58.160 no description 7e-29 219-313
HMMPanther PTHR13856 VHS 1.7e-93 38-368
HMMPanther PTHR13856:SF27 TARGET 1.7e-93 38-368
Seg seg seg NA 357-367
superfamily SSF89009 GAT-like 2.5e-27 180-313
Wolf-PSORT
Lj3g3v3639590.1	cyto 10, nucl_plas 2.5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3639590.1