Miyakogusa Predicted Gene

Lj3g3v3639160.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JAP0_SOYBN 183 61.0 75.3 (tr|I1JAP0) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G16660.1 133 49.1 64.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5465699-5467006 REVERSE LENGTH=168

Medicago Medtr5g007210.1 151 54.9 67.7 | transmembrane protein, putative | HC | chr5:1243259-1247003 | 20130731

Soybean Glyma01g44450.2 183 61.0 75.3

LJGI gnl|LJGI|TC59333 940 100.0 100.0 similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3639160.1 length: 156 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 57-72

Wolf-PSORT

Lj3g3v3639160.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3639160.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JAP0_SOYBN	183	61.0	75.3	(tr\|I1JAP0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G16660.1	133	49.1	64.2	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:5465699-5467006 REVERSE LENGTH=168
Medicago	Medtr5g007210.1	151	54.9	67.7	\| transmembrane protein, putative \| HC \| chr5:1243259-1247003 \| 20130731
Soybean	Glyma01g44450.2	183	61.0	75.3
LJGI	gnl\|LJGI\|TC59333	940	100.0	100.0	similar to UniRef100_A7PB65 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)

no_ID
Lj3g3v3639160.1				length: 156 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	57-72