Miyakogusa Predicted Gene

Lj3g3v3600520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JRM5_MEDTR 1060 85.5 90.0 (tr|G7JRM5) ABC transporter G family member OS=Medicago truncatula GN=MTR_4g076970 PE=4 SV=1
TAIR_pep AT3G21090.1 846 64.5 81.2 | Symbols: | ABC-2 type transporter family protein | chr3:7391497-7394933 REVERSE LENGTH=691
Medicago Medtr4g076970.1 1060 85.5 90.0 | white-brown-complex ABC transporter family protein | HC | chr4:29476417-29483154 | 20130731
Soybean Glyma12g02290.1 1026 82.1 88.0  
LJGI gnl|LJGI|TC79974 65.9 85.7 85.7 similar to UniRef100_A7PQV3 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3600520.1 length: 598 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.3e-11 11-112
IPR013525 ABC-2 type transporter
Cellular Component GO:0016020 membrane    
HMMPfam PF01061 ABC2_membrane 1.3e-30 276-484
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 7.3e-29 2-188
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.6e-31 3-173
HMMPanther PTHR19241 ATP-BINDING 2.5e-250 1-557
HMMPanther PTHR19241:SF20 ATP-BINDING 2.5e-250 1-557
Seg seg seg NA 529-542
Wolf-PSORT
Lj3g3v3600520.1	plas 12, nucl 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3600520.1