Miyakogusa Predicted Gene

Lj3g3v3599500.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T017_LOTJA 573 93.1 93.1 (tr|I3T017) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT3G13410.1 253 46.1 62.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:4362149-4364032 REVERSE LENGTH=321

Medicago Medtr1g055160.1 455 76.2 81.8 | transmembrane protein, putative | HC | chr1:24333758-24338398 | 20130731

Soybean Glyma11g09970.2 447 75.3 82.0

LJGI gnl|LJGI|TC64193 1909 100.0 100.0 similar to UniRef100_A7P0C9 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3599500.1 length: 319 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 3-16
282-301

Wolf-PSORT

Lj3g3v3599500.1 plas 6, vacu 4, extr 2, E.R._vacu 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3599500.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T017_LOTJA	573	93.1	93.1	(tr\|I3T017) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT3G13410.1	253	46.1	62.3	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). \| chr3:4362149-4364032 REVERSE LENGTH=321
Medicago	Medtr1g055160.1	455	76.2	81.8	\| transmembrane protein, putative \| HC \| chr1:24333758-24338398 \| 20130731
Soybean	Glyma11g09970.2	447	75.3	82.0
LJGI	gnl\|LJGI\|TC64193	1909	100.0	100.0	similar to UniRef100_A7P0C9 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

no_ID
Lj3g3v3599500.1				length: 319 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	3-16 282-301