Miyakogusa Predicted Gene

Lj3g3v3579360.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JQK3_MEDTR 880 97.3 97.8 (tr|G7JQK3) AP-2 complex subunit beta OS=Medicago truncatula GN=MTR_4g076210 PE=4 SV=1
TAIR_pep AT4G23460.1 855 93.9 96.4 | Symbols: | Adaptin family protein | chr4:12243899-12248898 REVERSE LENGTH=893
Medicago Medtr4g076210.1 880 97.3 97.8 | beta-adaptin-like protein | HC | chr4:29181926-29190719 | 20130731
Soybean Glyma01g43680.1 873 96.9 97.5  
LJGI gnl|LJGI|TC59578 1546 100.0 100.0 homologue to UniRef100_A7QNL1 Cluster: Chromosome chr2 scaffold_132, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_132, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3579360.1 length: 459 aa.
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030117 membrane coat    
HMMPfam PF01602 Adaptin_N 7.4e-138 16-448
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 5.2e-143 5-447
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.6e-106 6-448
IPR016342 AP-1, 2,4 complex subunit beta
Molecular Function GO:0008565 protein transporter activity    
Biological Process GO:0015031 protein transport    
HMMPIR PIRSF002291 Adaptor 1e-211 1-459
IPR026739 AP complex subunit beta
Biological Process GO:0016192 vesicle-mediated transport    
HMMPanther PTHR11134 ADAPTER-RELATED 2.8e-279 5-448
no_ID  
HMMPanther PTHR11134:SF3 ADAPTER-RELATED 2.8e-279 5-448
Seg seg seg NA 178-187
446-458
Wolf-PSORT
Lj3g3v3579360.1	cyto 6, chlo 3, pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3579360.1