Miyakogusa Predicted Gene

Lj3g3v3579340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LNU7_SOYBN 2137 64.0 73.4 (tr|K7LNU7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G12400.1 946 38.9 54.0 | Symbols: | DNA binding;zinc ion binding;DNA binding | chr5:4013813-4021018 FORWARD LENGTH=1602
Medicago Medtr4g076180.1 1845 62.4 70.7 | DNA-binding; zinc ion-binding; DNA-binding protein, putative | HC | chr4:29158251-29170843 | 20130731
Soybean Glyma12g02470.2 1976 61.8 70.4  
LJGI gnl|LJGI|AV407042 809 100.0 100.0 similar to UniRef100_A7PQX5 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3579340.1 length: 1733 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 15 657-700
1380-1427
1602-1648
IPR004022 DDT domain
HMMPfam PF02791 DDT 2.2e-09 463-519
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 3.8e-05 621-708
1565-1656
1368-1445
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.5e-05 652-702
1598-1653
IPR018500 DDT domain, subgroup
HMMSmart SM00571 domain 3e-06 460-520
IPR018501 DDT domain superfamily
ProfileScan PS50827 DDT 14.081 460-520
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 658-699
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 1.4e-09 658-700
ProfileScan PS50016 ZF_PHD_2 9.962 655-702
no_ID  
HMMPanther PTHR22880 FALZ-RELATED 4.6e-37 463-738
HMMPanther PTHR22880:SF76 PUTATIVE 4.6e-37 463-738
Seg seg seg NA 2-25
56-83
128-161
313-323
389-399
415-426
895-907
1063-1070
1097-1108
1128-1143
1155-1160
1525-1534
1715-1727
Wolf-PSORT
Lj3g3v3579340.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3579340.1