Miyakogusa Predicted Gene

Lj3g3v3556020.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1LPE9_SOYBN 446 72.2 78.2 (tr|I1LPE9) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G17040.1 317 53.9 67.6 | Symbols: anac036, NAC036 | NAC domain containing protein 36 | chr2:7407123-7408120 FORWARD LENGTH=276

Medicago Medtr4g075980.1 392 67.8 72.9 | NAC transcription factor-like protein | HC | chr4:29048799-29051425 | 20130731

Soybean Glyma12g02540.1 446 72.2 78.2

LJGI gnl|LJGI|FS328888 983 99.8 99.8 homologue to UniRef100_Q52QR0 Cluster: NAC6 protein; n=1; Glycine max|Rep: NAC6 protein - Glycine max (Soybean), partial (55%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3556020.1 length: 314 aa.

IPR003441 No apical meristem (NAM) protein

method AccNumber shortName E-value location

Molecular Function GO:0003677 DNA binding

Biological Process GO:0006355 regulation of transcription, DNA-dependent

HMMPfam PF02365 NAM 3.5e-46 16-143

ProfileScan PS51005 NAC 54.453 15-161

superfamily SSF101941 NAC 3.1e-54 7-162

no_ID

HMMPanther PTHR31486 FAMILY 2.2e-102 7-198

HMMPanther PTHR31486:SF0 SUBFAMILY 2.2e-102 7-198

Seg seg seg NA 183-191
218-235
257-268

Wolf-PSORT

Lj3g3v3556020.1 nucl 12, cyto 1, extr 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3556020.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1LPE9_SOYBN	446	72.2	78.2	(tr\|I1LPE9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G17040.1	317	53.9	67.6	\| Symbols: anac036, NAC036 \| NAC domain containing protein 36 \| chr2:7407123-7408120 FORWARD LENGTH=276
Medicago	Medtr4g075980.1	392	67.8	72.9	\| NAC transcription factor-like protein \| HC \| chr4:29048799-29051425 \| 20130731
Soybean	Glyma12g02540.1	446	72.2	78.2
LJGI	gnl\|LJGI\|FS328888	983	99.8	99.8	homologue to UniRef100_Q52QR0 Cluster: NAC6 protein; n=1; Glycine max\|Rep: NAC6 protein - Glycine max (Soybean), partial (55%)

IPR003441	No apical meristem (NAM) protein
Lj3g3v3556020.1				length: 314 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003677	DNA binding
Biological Process	GO:0006355	regulation of transcription, DNA-dependent
HMMPfam	PF02365	NAM	3.5e-46	16-143
ProfileScan	PS51005	NAC	54.453	15-161
superfamily	SSF101941	NAC	3.1e-54	7-162
no_ID
HMMPanther	PTHR31486	FAMILY	2.2e-102	7-198
HMMPanther	PTHR31486:SF0	SUBFAMILY	2.2e-102	7-198
Seg	seg	seg	NA	183-191 218-235 257-268