Miyakogusa Predicted Gene

Lj3g3v3551760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KZ45_SOYBN 288 44.2 59.5 (tr|I1KZ45) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G56370.2 151 31.5 45.7 | Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr5:22836200-22837619 REVERSE LENGTH=421
Medicago Medtr1g041245.1 245 39.9 55.8 | cyclin-like F-box protein | HC | chr1:15330666-15327969 | 20130731
Soybean Glyma08g46320.1 288 44.2 59.5  
LJGI gnl|LJGI|DC599890 1112 99.8 99.8 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_111, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3551760.1 length: 375 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2.7e-05 4-42
HMMSmart SM00256 A 0.005 8-48
ProfileScan PS50181 FBOX 9.577 2-50
superfamily SSF81383 F-box 2e-09 3-92
IPR006566 FBD
HMMPfam PF08387 FBD 1.2e-15 295-344
HMMSmart SM00579 domain 1.8e-12 303-375
IPR013101 Leucine-rich repeat 2
HMMPfam PF07723 LRR_2 3.4e-08 158-182
no_ID  
Gene3D G3DSA:3.80.10.10 no description 2.7e-14 3-316
HMMPanther PTHR32484 FAMILY 4.9e-58 1-375
Seg seg seg NA 117-130
superfamily SSF52047 RNI-like 2.7e-10 91-338
Wolf-PSORT
Lj3g3v3551760.1	cyto 5, chlo 3, cyto_E.R. 3, golg 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3551760.1