Miyakogusa Predicted Gene

Lj3g3v3541690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L5T7_SOYBN 2585 66.6 75.0 (tr|K7L5T7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G30150.1 625 32.3 48.4 | Symbols: | CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink). | chr4:14742452-14749764 FORWARD LENGTH=2009
Medicago Medtr4g075520.2 2853 69.8 78.6 | Urb2/Npa2 family protein | HC | chr4:28857053-28847279 | 20130731
Soybean Glyma08g10450.1 2295 64.3 71.8  
LJGI gnl|LJGI|AV778017 406 100.0 100.0 similar to UniRef100_A7P845 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3541690.1 length: 2051 aa.
IPR018849 Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal
method AccNumber shortName E-value location
HMMPfam PF10441 Urb2 7.7e-28 1806-2048
no_ID  
Seg seg seg NA 14-19
283-296
462-471
766-784
792-801
1040-1049
1225-1237
1485-1516
Wolf-PSORT
Lj3g3v3541690.1	plas 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3541690.1