Miyakogusa Predicted Gene

Lj3g3v3541670.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SCM3_LOTJA 208 82.2 82.2 (tr|I3SCM3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G21180.1 82.4 43.1 55.4 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9074956-9075351 REVERSE LENGTH=131

Medicago Medtr4g075500.1 148 58.6 69.5 | transmembrane protein, putative | HC | chr4:28843416-28842625 | 20130731

Soybean Glyma12g02720.1 154 61.2 70.5

LJGI gnl|LJGI|TC61781 773 100.0 100.0 weakly similar to UniRef100_A7P023 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3541670.1 length: 129 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 25-37
106-115

Wolf-PSORT

Lj3g3v3541670.1 vacu 9, plas 2, extr 1, E.R. 1, golg 1, nucl_plas 1, cysk_plas 1, mito_plas 1, cyto_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3541670.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SCM3_LOTJA	208	82.2	82.2	(tr\|I3SCM3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G21180.1	82.4	43.1	55.4	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr2:9074956-9075351 REVERSE LENGTH=131
Medicago	Medtr4g075500.1	148	58.6	69.5	\| transmembrane protein, putative \| HC \| chr4:28843416-28842625 \| 20130731
Soybean	Glyma12g02720.1	154	61.2	70.5
LJGI	gnl\|LJGI\|TC61781	773	100.0	100.0	weakly similar to UniRef100_A7P023 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)

no_ID
Lj3g3v3541670.1				length: 129 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	25-37 106-115