Miyakogusa Predicted Gene

Lj3g3v3527360.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A9PJF9_9ROSI 476 57.9 69.2 (tr|A9PJF9) Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1
TAIR_pep AT3G12400.1 408 57.4 68.1 | Symbols: ELC, ATELC | Ubiquitin-conjugating enzyme/RWD-like protein | chr3:3944600-3945796 REVERSE LENGTH=398
Medicago Medtr4g075250.1 290 83.1 90.4 | ubiquitin-conjugating enzyme/RWD-like protein | HC | chr4:28738871-28737155 | 20130731
Soybean Glyma12g02840.1 295 88.0 91.1  
LJGI gnl|LJGI|TC59184 2409 100.0 100.0 similar to UniRef100_A7QHJ8 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3527360.1 length: 404 aa.
IPR008883 Ubiquitin E2 variant, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006464 cellular protein modification process    
Biological Process GO:0015031 protein transport    
HMMPfam PF05743 UEV 1.6e-39 41-161
ProfileScan PS51322 UEV 44.774 21-165
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Gene3D G3DSA:3.10.110.10 no description 4.6e-42 24-164
superfamily SSF54495 UBC-like 2.4e-32 21-165
IPR017916 Steadiness box
HMMPfam PF09454 Vps23_core 2.3e-23 319-382
ProfileScan PS51312 SB 12.630 325-393
no_ID  
Coil coil coiled-coil NA 268-296
HMMPanther PTHR23306 TUMOR 1.7e-171 16-402
HMMPanther PTHR23306:SF3 SUBFAMILY 1.7e-171 16-402
Seg seg seg NA 167-174
178-213
277-291
376-392
superfamily SSF140111 Endosomal 9.9e-19 325-388
Wolf-PSORT
Lj3g3v3527360.1	cyto 6, nucl 5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3527360.1