Miyakogusa Predicted Gene

Lj3g3v3527160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N2J6_SOYBN 786 80.5 89.2 (tr|K7N2J6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G32415.1 522 54.5 71.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:11695611-11697896 FORWARD LENGTH=761
Medicago Medtr5g013950.1 785 80.3 88.3 | pentatricopeptide (PPR) repeat protein | HC | chr5:4606693-4603955 | 20130731
Soybean Glyma20g22740.1 784 80.4 89.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3527160.1 length: 467 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.35 1-22
102-124
133-160
236-258
337-357
HMMPfam PF13041 PPR_2 2.3e-08 161-206
263-309
HMMTigr TIGR00756 PPR: 0.00025 103-124
133-160
164-195
264-298
299-332
ProfileScan PS51375 PPR 5.546 1-28
29-63
161-195
99-133
134-160
262-296
231-261
297-332
333-363
400-434
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.8e-07 340-417
no_ID  
HMMPanther PTHR24015 FAMILY 2.7e-152 102-467
HMMPanther PTHR24015:SF171SUBFAMILY NOT 2.7e-152 102-467
Wolf-PSORT
Lj3g3v3527160.1	cyto 6, chlo 3, cysk 3, cyto_pero 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3527160.1