Miyakogusa Predicted Gene

Lj3g3v3525970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IKW7_MEDTR 412 79.7 85.4 (tr|G7IKW7) SNW domain-containing protein OS=Medicago truncatula GN=MTR_2g030450 PE=4 SV=1
TAIR_pep AT1G77180.3 341 65.9 77.0 | Symbols: SKIP | chromatin protein family | chr1:28999791-29001632 REVERSE LENGTH=511
Medicago Medtr2g030450.1 412 79.7 85.4 | GAMYB-binding protein | HC | chr2:11456477-11453867 | 20130731
Soybean Glyma01g01190.1 309 78.3 83.3  
LJGI gnl|LJGI|TC82121 1166 100.0 100.0 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1; Glycine max|Rep: GAMYB-binding protein - Glycine max (Soybean), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3525970.1 length: 259 aa.
IPR004015 SKI-interacting protein SKIP, SNW domain
method AccNumber shortName E-value location
Biological Process GO:0000398 mRNA splicing, via spliceosome    
Cellular Component GO:0005681 spliceosomal complex    
HMMPfam PF02731 SKIP_SNW 3.2e-20 187-259
IPR017862 SKI-interacting protein, SKIP
Biological Process GO:0000398 mRNA splicing, via spliceosome    
Cellular Component GO:0005681 spliceosomal complex    
HMMPanther PTHR12096 NUCLEAR 9e-111 2-259
no_ID  
Coil coil coiled-coil NA 142-163
Seg seg seg NA 137-147
233-248
Wolf-PSORT
Lj3g3v3525970.1	nucl 7, cyto 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3525970.1