Miyakogusa Predicted Gene

Lj3g3v3523870.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JPI0_MEDTR 1400 57.8 65.3 (tr|G7JPI0) Hepatoma-derived growth factor-like protein OS=Medicago truncatula GN=MTR_4g075060 PE=4 SV=1
TAIR_pep AT5G23150.1 402 54.0 67.3 | Symbols: HUA2 | Tudor/PWWP/MBT domain-containing protein | chr5:7786173-7792080 FORWARD LENGTH=1392
Medicago Medtr4g075060.1 1419 59.3 67.0 | enhancer OF AG-4-like protein, putative | LC | chr4:28645417-28636190 | 20130731
Soybean Glyma12g02980.1 1248 62.9 70.1  
LJGI gnl|LJGI|TC77518 1068 99.1 99.1 similar to UniRef100_A7P2V8 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3523870.1 length: 1372 aa.
IPR000313 PWWP
method AccNumber shortName E-value location
HMMPfam PF00855 PWWP 2.8e-15 19-84
HMMSmart SM00293 domain 8.3e-13 18-75
ProfileScan PS50812 PWWP 11.761 20-77
IPR006569 CID domain
HMMSmart SM00582 no description 1.9e-40 832-963
ProfileScan PS51391 CID 24.071 825-966
no_ID  
Gene3D G3DSA:2.30.30.160 no description 6e-22 17-111
HMMPanther PTHR12550 HEPATOMA-DERIVED 1.4e-221 3-1135
HMMPanther PTHR12550:SF4 UNCHARACTERIZED 1.4e-221 3-1135
Seg seg seg NA 2-16
210-227
475-488
492-498
641-651
664-675
914-931
1121-1135
superfamily SSF63748 Tudor/PWWP/MBT 1.1e-24 9-123
Wolf-PSORT
Lj3g3v3523870.1	nucl 7, chlo 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3523870.1