Miyakogusa Predicted Gene

Lj3g3v3523820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JPH8_MEDTR 566 71.6 75.3 (tr|G7JPH8) Photosystem II stability/assembly factor HCF136 OS=Medicago truncatula GN=MTR_4g075040 PE=1 SV=1
TAIR_pep AT5G23120.1 517 76.8 82.6 | Symbols: HCF136 | photosystem II stability/assembly factor, chloroplast (HCF136) | chr5:7778154-7780463 FORWARD LENGTH=403
Medicago Medtr4g075040.1 566 71.6 75.3 | photosystem II stability/assembly factor HCF136 | HC | chr4:28614207-28620841 | 20130731
Soybean Glyma12g03020.1 546 69.9 75.3  
LJGI gnl|LJGI|TC61733 809 100.0 100.0 homologue to UniRef100_A7P2W0 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3523820.1 length: 405 aa.
IPR016705 Photosystem II HCF136, stability/assembly factor
method AccNumber shortName E-value location
HMMPIR PIRSF017875 Photosystem 3.8e-188 1-405
no_ID  
Gene3D G3DSA:2.130.10.140 no description 2e-15 309-390
HMMPanther PTHR32010 FAMILY 4e-57 39-405
HMMPanther PTHR32010:SF0 SUBFAMILY 4e-57 39-405
Seg seg seg NA 11-33
49-65
321-334
superfamily SSF110296 Oligoxyloglucan 4.5e-42 72-389
Wolf-PSORT
Lj3g3v3523820.1	chlo 9, mito 3, plas 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3523820.1