Miyakogusa Predicted Gene

Lj3g3v3513690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JPH8_MEDTR 629 79.3 82.8 (tr|G7JPH8) Photosystem II stability/assembly factor HCF136 OS=Medicago truncatula GN=MTR_4g075040 PE=1 SV=1
TAIR_pep AT5G23120.1 575 85.3 92.0 | Symbols: HCF136 | photosystem II stability/assembly factor, chloroplast (HCF136) | chr5:7778154-7780463 FORWARD LENGTH=403
Medicago Medtr4g075040.1 629 79.3 82.8 | photosystem II stability/assembly factor HCF136 | HC | chr4:28614207-28620841 | 20130731
Soybean Glyma12g03020.1 605 77.3 82.8  
LJGI gnl|LJGI|TC61733 1398 100.0 100.0 homologue to UniRef100_A7P2W0 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3513690.1 length: 392 aa.
IPR016705 Photosystem II HCF136, stability/assembly factor
method AccNumber shortName E-value location
HMMPIR PIRSF017875 Photosystem 9.7e-230 1-392
no_ID  
Gene3D G3DSA:2.130.10.140 no description 9.9e-19 277-386
HMMPanther PTHR32010 FAMILY 1.2e-72 39-390
HMMPanther PTHR32010:SF0 SUBFAMILY 1.2e-72 39-390
Seg seg seg NA 11-33
49-65
289-302
superfamily SSF110296 Oligoxyloglucan 1.3e-54 72-392
Wolf-PSORT
Lj3g3v3513690.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3513690.1