Miyakogusa Predicted Gene

Lj3g3v3511390.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LNY8_SOYBN 620 65.5 70.2 (tr|K7LNY8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G19840.1 425 46.9 59.8 | Symbols: ATPRP40C, PRP40C | pre-mRNA-processing protein 40C | chr3:6891228-6897227 FORWARD LENGTH=835
Medicago Medtr4g074440.1 640 65.4 69.0 | pre-mRNA-processing protein 40C | HC | chr4:28340546-28354758 | 20130731
Soybean Glyma11g10910.1 622 65.5 70.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3511390.2 length: 521 aa.
IPR001202 WW domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00397 WW 2e-07 86-113
136-165
HMMSmart SM00456 Domain 0.0012 83-115
135-167
PatternScan PS01159 WW_DOMAIN_1 NA 88-113
140-165
ProfileScan PS50020 WW_DOMAIN_2 11.704 82-115
140-167
superfamily SSF51045 WW 1.6e-08 138-175
86-123
IPR002713 FF domain
Gene3D G3DSA:1.10.10.440 no description 3.5e-17 298-363
364-425
432-498
HMMPfam PF01846 FF 2.9e-14 311-358
377-425
445-493
HMMSmart SM00441 Contains 3.3e-11 307-361
374-429
442-496
superfamily SSF81698 FF 3.4e-11 307-368
442-503
374-436
no_ID  
Coil coil coiled-coil NA 371-392
494-522
Gene3D G3DSA:2.20.70.10 no description 8.9e-10 88-117
139-168
HMMPanther PTHR15377:SF3 SUBFAMILY 7.7e-130 75-521
Seg seg seg NA 38-56
240-254
271-290
292-309
362-377
431-451
498-514
Wolf-PSORT
Lj3g3v3511390.2	chlo 7, nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3511390.2 Not targeted -68.508 -0.372 -11.941 95.22% -56.195