Miyakogusa Predicted Gene

Lj3g3v3500220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LSS6_SOYBN 1393 84.8 92.0 (tr|K7LSS6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G60860.1 1011 65.0 76.9 | Symbols: AGD2 | ARF-GAP domain 2 | chr1:22401244-22407639 REVERSE LENGTH=776
Medicago Medtr4g074170.1 1358 83.1 90.2 | ADP-ribosylation factor GTPase-activating protein AGD10 | HC | chr4:28207941-28219419 | 20130731
Soybean Glyma11g11130.1 1361 83.5 90.8  
LJGI gnl|LJGI|FS334020 1372 100.0 100.0 similar to UniRef100_A7PNG9 Cluster: Chromosome chr1 scaffold_22, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_22, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3500220.1 length: 775 aa.
IPR001164 Arf GTPase activating protein
method AccNumber shortName E-value location
Molecular Function GO:0008060 ARF GTPase activator activity    
Molecular Function GO:0008270 zinc ion binding    
Biological Process GO:0032312 regulation of ARF GTPase activity    
FPrintScan PR00405 REVINTRACTNG 1.6e-14 491-510
510-527
533-554
HMMPfam PF01412 ArfGap 2.8e-34 485-603
HMMSmart SM00105 Putative 7e-51 477-611
ProfileScan PS50115 ARFGAP 26.414 479-611
IPR001849 Pleckstrin homology domain
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005543 phospholipid binding    
HMMPfam PF00169 PH 5.9e-12 297-427
HMMSmart SM00233 Pleckstrin 5.4e-19 296-431
ProfileScan PS50003 PH_DOMAIN 15.730 295-429
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 0.001 682-711
715-744
ProfileScan PS50088 ANK_REPEAT 12.155 682-714
715-747
IPR004148 BAR domain
Molecular Function GO:0005515 protein binding    
Cellular Component GO:0005737 cytoplasm    
HMMPfam PF03114 BAR 4.3e-13 20-218
HMMSmart SM00721 no description 2.9e-32 13-220
IPR011993 Pleckstrin homology-like domain
Gene3D G3DSA:2.30.29.30 no description 1.6e-20 375-438
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 1.4e-20 676-760
HMMPfam PF12796 Ank_2 3.6e-14 674-746
ProfileScan PS50297 ANK_REP_REGION 24.984 682-775
superfamily SSF48403 Ankyrin 1.4e-21 683-769
IPR027267 Arfaptin homology (AH) domain/BAR domain
Gene3D G3DSA:1.20.1270.60 no description 2.1e-35 14-228
no_ID  
HMMPanther PTHR23180 CENTAURIN/ARF 0 5-773
HMMPanther PTHR23180:SF22 GCN4-COMPLEMENTING 0 5-773
superfamily SSF103657 BAR/IMD 2.1e-41 11-218
superfamily SSF50729 PH 1.5e-21 275-455
superfamily SSF57863 ArfGap/RecO-like 3.2e-38 477-608
Wolf-PSORT
Lj3g3v3500220.1	nucl 9, cyto 3, vacu 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3500220.1