Miyakogusa Predicted Gene

Lj3g3v3500070.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1LIY4_SOYBN 1287 57.6 65.4 (tr|I1LIY4) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT2G16640.1 947 76.6 82.3 | Symbols: ATTOC132, TOC132 | multimeric translocon complex in the outer envelope membrane 132 | chr2:7211489-7215109 REVERSE LENGTH=1206

Medicago Medtr2g030630.2 1001 80.1 84.9 | translocon outer complex protein | HC | chr2:11565496-11572493 | 20130731

Soybean Glyma11g11250.1 1215 56.0 64.0

LJGI gnl|LJGI|BI419029 1217 99.4 99.4 similar to UniRef100_A3M6Q3 Cluster: Protoheme IX farnesyltransferase; n=1; Acinetobacter baumannii ATCC 17978|Rep: Protoheme IX farnesyltransferase - Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755), partial (6%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3500070.1 length: 1284 aa.

IPR005690 Chloroplast protein import component Toc86/159

method AccNumber shortName E-value location

Molecular Function GO:0016817 hydrolase activity, acting on acid anhydrides

HMMTigr TIGR00993 3a0901s04IAP86: 0 658-1283

IPR006703 AIG1

Molecular Function GO:0005525 GTP binding

HMMPfam PF04548 AIG1 3.5e-30 782-940

IPR024283 Domain of unknown function DUF3406, chloroplast translocase

HMMPfam PF11886 DUF3406 5e-69 1137-1283

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 1.4e-18 768-986

no_ID

Coil coil coiled-coil NA 1099-1123

Gene3D G3DSA:3.40.50.300 no description 1.3e-69 757-1001

HMMPanther PTHR10903 GTPASE, 2.5e-241 702-1284

HMMPanther PTHR10903:SF23 SUBFAMILY 2.5e-241 702-1284

Seg seg seg NA 4-15
19-38
59-82
183-194
621-627
650-667
681-692
1041-1066
1093-1115

Wolf-PSORT

Lj3g3v3500070.1 cyto 7, chlo 3, nucl 2, plas 1, golg 1, cysk_nucl 1, golg_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3500070.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1LIY4_SOYBN	1287	57.6	65.4	(tr\|I1LIY4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT2G16640.1	947	76.6	82.3	\| Symbols: ATTOC132, TOC132 \| multimeric translocon complex in the outer envelope membrane 132 \| chr2:7211489-7215109 REVERSE LENGTH=1206
Medicago	Medtr2g030630.2	1001	80.1	84.9	\| translocon outer complex protein \| HC \| chr2:11565496-11572493 \| 20130731
Soybean	Glyma11g11250.1	1215	56.0	64.0
LJGI	gnl\|LJGI\|BI419029	1217	99.4	99.4	similar to UniRef100_A3M6Q3 Cluster: Protoheme IX farnesyltransferase; n=1; Acinetobacter baumannii ATCC 17978\|Rep: Protoheme IX farnesyltransferase - Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755), partial (6%)

IPR005690	Chloroplast protein import component Toc86/159
Lj3g3v3500070.1				length: 1284 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0016817	hydrolase activity, acting on acid anhydrides
HMMTigr	TIGR00993	3a0901s04IAP86:	0	658-1283
IPR006703	AIG1
Molecular Function	GO:0005525	GTP binding
HMMPfam	PF04548	AIG1	3.5e-30	782-940
IPR024283	Domain of unknown function DUF3406, chloroplast translocase
HMMPfam	PF11886	DUF3406	5e-69	1137-1283
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	1.4e-18	768-986
no_ID
Coil	coil	coiled-coil	NA	1099-1123
Gene3D	G3DSA:3.40.50.300	no description	1.3e-69	757-1001
HMMPanther	PTHR10903	GTPASE,	2.5e-241	702-1284
HMMPanther	PTHR10903:SF23	SUBFAMILY	2.5e-241	702-1284
Seg	seg	seg	NA	4-15 19-38 59-82 183-194 621-627 650-667 681-692 1041-1066 1093-1115