Miyakogusa Predicted Gene
- Lj3g3v3475730.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A9PAI6_POPTR |
870 |
85.9 |
92.3 |
(tr|A9PAI6) Auxin influx carrier component OS=Populus trichocarpa GN=PtrAUX6 PE=2 SV=1 |
| TAIR_pep |
AT2G21050.1 |
840 |
86.4 |
92.8 |
| Symbols: LAX2 | like AUXIN RESISTANT 2 | chr2:9034289-9036439 FORWARD LENGTH=483 |
| Medicago |
Medtr4g073770.1 |
896 |
89.3 |
93.2 |
| auxin influx transporter | HC | chr4:28003374-28007657 | 20130731 |
| Soybean |
Glyma11g11310.1 |
867 |
88.4 |
92.8 |
|
| LJGI |
gnl|LJGI|TC62040 |
274 |
81.7 |
81.7 |
homologue to UniRef100_Q9FEL6 Cluster: Auxin transporter-like protein 3; n=1; Medicago truncatula|Rep: Auxin transporter-like protein 3 - Medicago truncatula (Barrel medic), partial (53%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3475730.1 |
length: 482 aa. |
| IPR013057 |
Amino acid transporter, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01490 |
Aa_trans |
5e-74 |
37-430 |
| no_ID |
|
| HMMPanther |
PTHR22950 |
AMINO |
0 |
4-458 |
| HMMPanther |
PTHR22950:SF3 |
AUX1-LIKE |
0 |
4-458 |
| Seg |
seg |
seg |
NA |
262-274 |
- Wolf-PSORT
Lj3g3v3475730.1 cyto 6, vacu 3.5, plas 3, cyto_nucl 3, cyto_pero 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3475730.1 |
|