Miyakogusa Predicted Gene

Lj3g3v3453440.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7JNE5_MEDTR 1045 64.0 72.8 (tr|G7JNE5) Beta-galactosidase OS=Medicago truncatula GN=MTR_4g073290 PE=3 SV=1
TAIR_pep AT2G16730.1 859 52.6 66.4 | Symbols: BGAL13 | glycosyl hydrolase family 35 protein | chr2:7261986-7266105 REVERSE LENGTH=848
Medicago Medtr4g073290.1 1045 64.0 72.8 | beta-galactosidase-like protein | HC | chr4:27720128-27725580 | 20130731
Soybean Glyma12g03650.1 1055 63.4 74.3  
LJGI gnl|LJGI|AU089374 1185 97.4 97.4 weakly similar to UniRef100_A4D0F8 Cluster: Beta-galactosidase; n=1; Gossypium hirsutum|Rep: Beta-galactosidase - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3453440.1 length: 723 aa.
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin domain
method AccNumber shortName E-value location
Molecular Function GO:0030246 carbohydrate binding    
HMMPfam PF02140 Gal_Lectin 3.9e-13 635-721
ProfileScan PS50228 SUEL_LECTIN 12.654 631-722
IPR001944 Glycoside hydrolase, family 35
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00742 GLHYDRLASE35 1.2e-45 43-60
64-82
240-255
277-292
296-312
507-521
534-550
HMMPanther PTHR23421 BETA-GALACTOSIDASE 0 1-619
HMMPfam PF01301 Glyco_hydro_35 5.1e-60 39-115
116-328
IPR008979 Galactose-binding domain-like
Gene3D G3DSA:2.60.120.260 no description 9.2e-10 498-584
superfamily SSF49785 Galactose-binding 0.0046 472-622
416-465
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 1.3e-104 28-333
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 8.4e-91 28-333
IPR019801 Glycoside hydrolase, family 35, conserved site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01182 GLYCOSYL_HYDROL_F35 NA 161-173
no_ID  
HMMPanther PTHR23421:SF2 BETA-GALACTOSIDASE 0 1-619
Seg seg seg NA 11-26
Wolf-PSORT
Lj3g3v3453440.1	extr 3, vacu 3, chlo 2, E.R. 2, golg 2, cyto 1, plas 1, chlo_mito 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3453440.1