Miyakogusa Predicted Gene
- Lj3g3v3430220.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KJL3_SOYBN |
306 |
76.6 |
89.4 |
(tr|K7KJL3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G07670.1 |
238 |
63.0 |
76.7 |
| Symbols: | RNI-like superfamily protein | chr5:2430421-2432065 FORWARD LENGTH=476 |
| Medicago |
Medtr3g408430.1 |
317 |
78.7 |
88.8 |
| F-box plant-like protein | HC | chr3:1495741-1498734 | 20130731 |
| Soybean |
Glyma04g13930.1 |
304 |
76.6 |
89.4 |
|
| LJGI |
gnl|LJGI|FS346553 |
597 |
98.7 |
98.7 |
similar to UniRef100_A7QUZ0 Cluster: Chromosome chr16 scaffold_182, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_182, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3430220.1 |
length: 189 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
4.3e-13 |
18-161 |
| HMMPanther |
PTHR23125 |
F-BOX/LEUCINE |
1e-73 |
1-188 |
| HMMPanther |
PTHR23125:SF106EBF1 |
(EIN3-BINDING |
1e-73 |
1-188 |
| superfamily |
SSF52047 |
RNI-like |
8e-13 |
2-160 |
- Wolf-PSORT
Lj3g3v3430220.1 cyto 7.5, cyto_E.R. 4.5, nucl 2, chlo 1, plas 1, extr 1, golg 1, cysk_nucl 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3430220.1 |
|