Miyakogusa Predicted Gene
- Lj3g3v3408010.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JL53_MEDTR |
102 |
90.7 |
92.6 |
(tr|G7JL53) Auxin-induced protein-like protein OS=Medicago truncatula GN=MTR_4g072580 PE=4 SV=1 |
| TAIR_pep |
AT4G38840.1 |
93.2 |
73.6 |
90.6 |
| Symbols: | SAUR-like auxin-responsive protein family | chr4:18125174-18125473 REVERSE LENGTH=99 |
| Medicago |
Medtr4g072580.1 |
102 |
90.7 |
92.6 |
| SAUR-like auxin-responsive family protein | HC | chr4:27498339-27498602 | 20130731 |
| Soybean |
Glyma12g14980.1 |
99.8 |
84.9 |
90.6 |
|
| LJGI |
gnl|LJGI|GO028197 |
123 |
88.1 |
88.1 |
similar to UniRef100_P33083 Cluster: Auxin-induced protein 6B; n=1; Glycine max|Rep: Auxin-induced protein 6B - Glycine max (Soybean), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3408010.1 |
length: 54 aa. |
| IPR003676 |
Auxin responsive SAUR protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02519 |
Auxin_inducible |
6.5e-21 |
2-52 |
| no_ID |
|
| HMMPanther |
PTHR31929 |
FAMILY |
1.9e-25 |
2-53 |
- Wolf-PSORT
Lj3g3v3408010.1 cyto_nucl 5.5, nucl 5, mito 5, chlo 1, plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3408010.1 |
|