Miyakogusa Predicted Gene

Lj3g3v3386580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JJU1_MEDTR 348 60.8 66.8 (tr|G7JJU1) GATA transcription factor OS=Medicago truncatula GN=MTR_4g071590 PE=4 SV=1
TAIR_pep AT4G36240.1 155 40.9 49.4 | Symbols: GATA7 | GATA transcription factor 7 | chr4:17147376-17148211 REVERSE LENGTH=238
Medicago Medtr4g071590.1 348 60.8 66.8 | GATA type zinc finger transcription factor family protein | HC | chr4:27083364-27084692 | 20130731
Soybean Glyma12g04180.1 334 63.8 68.6  
LJGI gnl|LJGI|TC77034 1400 100.0 100.0 similar to UniRef100_A7P7X0 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3386580.1 length: 303 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 2.4e-16 220-253
HMMSmart SM00401 zinc 5.5e-14 214-268
PatternScan PS00344 GATA_ZN_FINGER_1 NA 220-245
ProfileScan PS50114 GATA_ZN_FINGER_2 11.068 214-250
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 1.3e-13 218-251
IPR016679 Transcription factor, GATA, plant
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0045893 positive regulation of transcription, DNA-dependent    
HMMPIR PIRSF016992 GATA 3.3e-91 1-303
no_ID  
HMMPanther PTHR10071 TRANSCRIPTION 1.2e-42 174-286
HMMPanther PTHR10071:SF113ZINC FINGER 1.2e-42 174-286
Seg seg seg NA 59-68
154-169
195-205
superfamily SSF57716 Glucocorticoid 1.1e-18 214-279
Wolf-PSORT
Lj3g3v3386580.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3386580.1