Miyakogusa Predicted Gene

Lj3g3v3386570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JJT6_MEDTR 647 84.7 89.2 (tr|G7JJT6) Rho guanine nucleotide exchange factor OS=Medicago truncatula GN=MTR_4g071540 PE=4 SV=1
TAIR_pep AT4G34660.1 561 74.1 82.2 | Symbols: | SH3 domain-containing protein | chr4:16545595-16548294 REVERSE LENGTH=368
Medicago Medtr4g071540.1 647 84.7 89.2 | clathrin-binding protein, putative | HC | chr4:27045039-27041286 | 20130731
Soybean Glyma11g11950.1 645 85.7 88.1  
LJGI gnl|LJGI|TC64981 2183 99.7 99.7 similar to UniRef100_A7NT19 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3386570.1 length: 371 aa.
IPR001452 Src homology-3 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00018 SH3_1 2.5e-08 309-352
HMMSmart SM00326 Src 8.7e-13 305-360
ProfileScan PS50002 SH3 11.910 309-361
superfamily SSF50044 SH3-domain 2.8e-15 257-360
IPR027267 Arfaptin homology (AH) domain/BAR domain
Gene3D G3DSA:1.20.1270.60 no description 3.4e-05 87-265
no_ID  
Coil coil coiled-coil NA 1-22
149-177
186-214
220-241
Gene3D G3DSA:2.30.30.40 no description 1.5e-13 308-359
HMMPanther PTHR22820 SH2 1.1e-60 109-364
HMMPanther PTHR22820:SF9 UNCHARACTERIZED 1.1e-60 109-364
Seg seg seg NA 27-33
107-119
214-226
superfamily SSF103657 BAR/IMD 8.6e-24 43-258
Wolf-PSORT
Lj3g3v3386570.1	cyto 6, mito 3, cyto_pero 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3386570.1