Miyakogusa Predicted Gene

Lj3g3v3376200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LP68_SOYBN 1552 73.0 78.9 (tr|K7LP68) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G39050.1 1231 62.7 72.2 | Symbols: | Kinesin motor family protein | chr4:18193462-18200148 FORWARD LENGTH=1055
Medicago Medtr4g071210.1 1539 73.1 78.0 | kinesin motor catalytic domain protein | HC | chr4:26860092-26848274 | 20130731
Soybean Glyma12g04260.2 1463 69.3 75.2  
LJGI gnl|LJGI|TC63218 1043 100.0 100.0 similar to UniRef100_A7P7W1 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3376200.1 length: 1091 aa.
IPR001752 Kinesin, motor domain
method AccNumber shortName E-value location
Molecular Function GO:0003777 microtubule motor activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005875 microtubule associated complex    
Biological Process GO:0007018 microtubule-based movement    
FPrintScan PR00380 KINESINHEAVY 1e-29 180-201
294-311
327-345
376-397
Gene3D G3DSA:3.40.850.10 no description 1e-112 105-426
HMMPfam PF00225 Kinesin 4.5e-103 115-426
HMMSmart SM00129 Kinesin 1.6e-132 107-434
ProfileScan PS50067 KINESIN_MOTOR_DOMAIN2 45.790 106-356
IPR001841 Zinc finger, RING-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 10.925 1044-1079
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 6.3e-07 1026-1084
IPR019821 Kinesin, motor region, conserved site
Molecular Function GO:0003777 microtubule motor activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0007018 microtubule-based movement    
PatternScan PS00411 KINESIN_MOTOR_DOMAIN1 NA 326-337
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.6e-109 109-471
no_ID  
Coil coil coiled-coil NA 442-463
476-511
655-676
717-752
765-793
821-849
899-948
HMMPanther PTHR24115 FAMILY 0 1-1089
HMMPanther PTHR24115:SF160SUBFAMILY NOT 0 1-1089
HMMPfam PF13920 zf-C3HC4_3 2.4e-10 1042-1084
Seg seg seg NA 2-12
19-33
43-55
79-85
101-115
563-578
677-688
733-745
803-821
907-942
superfamily SSF57850 RING/U-box 6.3e-07 1036-1091
Wolf-PSORT
Lj3g3v3376200.1	chlo 10, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3376200.1