Miyakogusa Predicted Gene

Lj3g3v3363560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B0BLI5_LOTJA 1104 100.0 100.0 (tr|B0BLI5) CM0216.390.nc protein OS=Lotus japonicus GN=CM0216.390.nc PE=3 SV=1
TAIR_pep AT4G34570.1 836 76.1 87.1 | Symbols: THY-2 | thymidylate synthase 2 | chr4:16511129-16514110 REVERSE LENGTH=565
Medicago Medtr4g070670.1 988 88.8 93.6 | dihydrofolate reductase-thymidylate synthase-like protein | HC | chr4:26618056-26613509 | 20130731
Soybean Glyma12g04480.1 969 87.2 92.6  
LJGI gnl|LJGI|TC62743 1352 100.0 100.0 similar to UniRef100_P51820 Cluster: Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase ; Thymidylate synthase ]; n=1; Glycine max|Rep: Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase ; Thymidylate synthase ] - Glycine max (Soybean), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3363560.1 length: 528 aa.
IPR000398 Thymidylate synthase
method AccNumber shortName E-value location
Molecular Function GO:0004799 thymidylate synthase activity    
Biological Process GO:0006231 dTMP biosynthetic process    
FPrintScan PR00108 THYMDSNTHASE 7.900030794430247E-54 286-307
379-398
405-420
423-449
461-478
HMMPfam PF00303 Thymidylat_synt 4.400000000000026E-122 245-528
HMMTigr TIGR03284 thym_sym 1.6999999999999846E-104 247-528
IPR001796 Dihydrofolate reductase domain
Molecular Function GO:0004146 dihydrofolate reductase activity    
Biological Process GO:0006545 glycine biosynthetic process    
Biological Process GO:0009165 nucleotide biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00186 DHFR_1 1.9999999999999945E-31 26-201
ProfileScan PS51330 DHFR_2 0.0 24-201
IPR012262 Bifunctional dihydrofolate reductase/thymidylate synthase
Molecular Function GO:0004146 dihydrofolate reductase activity    
Molecular Function GO:0004799 thymidylate synthase activity    
Biological Process GO:0006730 one-carbon metabolic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000389 DHFR-TS 0.0 4-528
IPR020940 Thymidylate synthase, active site
Molecular Function GO:0004799 thymidylate synthase activity    
Biological Process GO:0006231 dTMP biosynthetic process    
PatternScan PS00091 THYMIDYLATE_SYNTHASE 0.0 390-418
IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain
Gene3D G3DSA:3.30.572.10G3DSA:3.30.572.10 T[237-528] 0.0  
superfamily SSF55831 Thymidylat_synth_C 0.0 190-528
IPR024072 Dihydrofolate reductase-like domain
Gene3D G3DSA:3.40.430.10G3DSA:3.40.430.10 T[22-201] 1.1999999998684078E-50  
superfamily SSF53597 SSF53597 2.6999899778780943E-55 23-203
no_ID  
HMMPanther PTHR11549 PTHR11549 0.0 1-528
HMMPanther PTHR11549:SF2 PTHR11549:SF2 0.0 1-528
Wolf-PSORT
Lj3g3v3363560.1	nucl 7, chlo 3, cyto 2, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3363560.1