Miyakogusa Predicted Gene

Lj3g3v3338610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LJE1_SOYBN 516 93.2 96.2 (tr|I1LJE1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G34460.1 444 82.0 89.1 | Symbols: AGB1, ELK4, ATAGB1 | GTP binding protein beta 1 | chr4:16477393-16479266 REVERSE LENGTH=377
Medicago Medtr3g116500.2 490 88.3 94.0 | guanine nucleotide-binding protein beta subunit-like protein | HC | chr3:54501019-54496204 | 20130731
Soybean Glyma11g12600.1 516 93.2 96.2  
LJGI gnl|LJGI|TC59674 850 88.6 88.6 homologue to UniRef100_Q9SW94 Cluster: G protein beta subunit; n=1; Pisum sativum|Rep: G protein beta subunit - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3338610.1 length: 265 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 9.5e-05 2-25
39-75
91-123
131-166
186-212
228-257
HMMSmart SM00320 WD40 0.022 35-75
82-123
127-166
169-212
218-258
ProfileScan PS50082 WD_REPEATS_2 10.943 42-84
90-132
134-175
226-265
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.3e-57 2-259
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 38.705 1-265
superfamily SSF50978 WD40 4.1e-55 1-258
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 62-76
199-213
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 5.3e-06 62-76
110-124
245-259
no_ID  
HMMPanther PTHR19850 GUANINE 1.8e-155 1-265
HMMPanther PTHR19850:SF3 GUANINE 1.8e-155 1-265
Wolf-PSORT
Lj3g3v3338610.1	nucl 6, cyto 6, cyto_nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3338610.1