| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LPB7_SOYBN | 1192 | 82.3 | 90.6 | (tr|K7LPB7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT3G18840.2 | 746 | 53.0 | 72.4 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:6496198-6498234 FORWARD LENGTH=678 |
| Medicago | Medtr4g068900.1 | 1134 | 79.7 | 88.2 | | PPR containing plant-like protein | HC | chr4:25858642-25860684 | 20130731 |
| Soybean | Glyma11g12940.1 | 1081 | 83.1 | 91.2 | |
| LJGI | gnl|LJGI|FS337970 | 1193 | 100.0 | 100.0 | weakly similar to UniRef100_A7P944 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%) |
| Lj3g3v3338200.1 | length: 695 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.72 | 29-56 60-83 166-186 197-218 332-358 360-385 536-559 |
| HMMPfam | PF13041 | PPR_2 | 4.4e-12 | 226-272 462-509 |
| HMMTigr | TIGR00756 | PPR: | 7.1e-06 | 29-56 228-261 332-361 465-497 |
| ProfileScan | PS51375 | PPR | 6.445 | 27-61 89-120 226-260 194-224 162-192 327-361 296-326 462-496 429-459 497-527 533-563 599-633 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 1.1e-08 | 540-618 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 578-599 |
| HMMPanther | PTHR24015 | FAMILY | 8.4e-205 | 12-666 |
| HMMPanther | PTHR24015:SF169PENTATRICOPEPTIDE | (PPR) | 8.4e-205 | 12-666 |
Lj3g3v3338200.1 chlo 5, E.R. 3, cyto 2, extr 2, E.R._plas 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v3338200.1 |