Miyakogusa Predicted Gene
- Lj3g3v3337500.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3RZI5_LOTJA |
530 |
92.9 |
92.9 |
(tr|I3RZI5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G18940.1 |
349 |
60.5 |
74.7 |
| Symbols: | clast3-related | chr3:6527081-6529050 REVERSE LENGTH=281 |
| Medicago |
Medtr4g068475.1 |
478 |
80.7 |
88.6 |
| clast3, related protein | HC | chr4:25716672-25721160 | 20130731 |
| Soybean |
Glyma11g13100.1 |
484 |
82.5 |
89.3 |
|
| LJGI |
gnl|LJGI|TC57842 |
1677 |
100.0 |
100.0 |
similar to UniRef100_A7P977 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3337500.1 |
length: 280 aa. |
| IPR016562 |
Proteasome assembly chaperone 2, eukaryotic |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPIR |
PIRSF010044 |
Uncharacterised |
6.7e-75 |
1-280 |
| IPR019151 |
Proteasome assembly chaperone 2 |
| HMMPfam |
PF09754 |
PAC2 |
6.1e-28 |
18-242 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
178-199 |
| HMMPanther |
PTHR12970 |
TUMOR |
9.6e-81 |
2-280 |
| Seg |
seg |
seg |
NA |
186-204 |
- Wolf-PSORT
Lj3g3v3337500.1 nucl 8, chlo 2, plas 2, cyto 1, pero 1, chlo_mito 1, golg_plas 1, cyto_pero 1, cysk_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3337500.1 |
|