Miyakogusa Predicted Gene

Lj3g3v3336290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D7STD9_VITVI 227 37.9 52.2 (tr|D7STD9) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00970 PE=4 SV=1
TAIR_pep AT2G15630.1 184 37.9 55.6 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:6814521-6816404 FORWARD LENGTH=627
Medicago Medtr4g068360.1 198 38.8 56.1 | PPR containing plant-like protein | HC | chr4:25633167-25630902 | 20130731
Soybean Glyma12g05220.1 202 36.9 51.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3336290.1 length: 319 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 2e-05 12-38
132-162
HMMPfam PF13041 PPR_2 1.2e-09 165-213
235-279
HMMTigr TIGR00756 PPR: 0.0002 12-39
132-166
167-200
235-268
271-304
ProfileScan PS51375 PPR 9.010 9-39
130-164
87-129
165-199
232-267
200-231
268-302
no_ID  
HMMPanther PTHR24015 FAMILY 3.8e-68 1-311
Wolf-PSORT
Lj3g3v3336290.1	cyto 9, cysk 2, nucl 1, E.R. 1, golg 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3336290.1