Miyakogusa Predicted Gene
- Lj3g3v3336200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
- A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3336200.1 |
length: 565 aa. |
IPR000310 |
Orn/Lys/Arg decarboxylase, major domain |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0003824 |
catalytic activity |
|
|
HMMPfam |
PF01276 |
OKR_DC_1 |
8.3e-67 |
81-383 |
IPR008286 |
Orn/Lys/Arg decarboxylase, C-terminal |
Molecular Function |
GO:0003824 |
catalytic activity |
|
|
Gene3D |
G3DSA:3.90.100.10 |
no description |
4.5e-23 |
485-561 |
HMMPfam |
PF03711 |
OKR_DC_1_C |
2.2e-09 |
498-545 |
IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
Molecular Function |
GO:0003824 |
catalytic activity |
|
|
Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
Gene3D |
G3DSA:3.40.640.10 |
no description |
9.9e-103 |
81-360 |
IPR015424 |
Pyridoxal phosphate-dependent transferase |
superfamily |
SSF53383 |
PLP-dependent |
1e-85 |
81-463 |
no_ID |
|
HMMPanther |
PTHR30475 |
LYSINE |
6.6e-101 |
44-562 |
HMMPanther |
PTHR30475:SF0 |
LYSINE |
6.6e-101 |
44-562 |
Seg |
seg |
seg |
NA |
3-11 |
- Wolf-PSORT
Lj3g3v3336200.1 chlo 9, mito 3, nucl 1, cyto 1, cyto_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj3g3v3336200.1 |
|