Miyakogusa Predicted Gene

Lj3g3v3336120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LJM2_SOYBN 1563 74.3 79.8 (tr|I1LJM2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G06720.1 674 58.6 71.5 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2060615-2067281 REVERSE LENGTH=1147
Medicago Medtr4g068150.1 1492 73.5 79.5 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr4:25549394-25539788 | 20130731
Soybean Glyma11g13340.1 1527 73.8 79.5  
LJGI gnl|LJGI|TC77658 1013 98.5 98.5 similar to UniRef100_A7QHJ9 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3336120.1 length: 1022 aa.
IPR007034 Ribosome biogenesis protein BMS1/TSR1, C-terminal
method AccNumber shortName E-value location
HMMPfam PF04950 DUF663 1.2e-76 532-853
IPR012948 AARP2CN
Cellular Component GO:0005634 nucleus    
Biological Process GO:0042254 ribosome biogenesis    
HMMPfam PF08142 AARP2CN 2.9e-30 70-156
HMMSmart SM00785 AARP2CN 3.4e-47 70-156
no_ID  
Coil coil coiled-coil NA 967-1011
HMMPanther PTHR12858 RIBOSOME 0 1-1021
HMMPanther PTHR12858:SF2 RIBOSOME 0 1-1021
Seg seg seg NA 280-295
348-377
420-428
555-570
969-1006
Wolf-PSORT
Lj3g3v3336120.1	cyto 8, nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3336120.1