Miyakogusa Predicted Gene

Lj3g3v3314940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 147 54.1 67.6 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 134 46.3 66.0 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 148 53.7 68.0 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma02g35540.1 117 45.0 61.6  
LJGI gnl|LJGI|TC82170 196 86.7 86.7 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3314940.1 length: 173 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 2e-05 29-57
HMMTigr TIGR00756 PPR: 0.0001 30-54
ProfileScan PS51375 PPR 6.730 26-60
61-95
113-147
148-173
no_ID  
HMMPanther PTHR24015 FAMILY 7.1e-13 20-173
HMMPanther PTHR24015:SF0 SUBFAMILY 7.1e-13 20-173
Wolf-PSORT
Lj3g3v3314940.1	cyto 8, nucl 2, extr 2, chlo 1, plas 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3314940.1