Miyakogusa Predicted Gene
- Lj3g3v3312860.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LQE3_SOYBN |
551 |
92.8 |
96.4 |
(tr|I1LQE3) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G59410.2 |
426 |
72.8 |
83.9 |
| Symbols: GCN2 | protein kinase family protein | chr3:21950575-21959151 FORWARD LENGTH=1265 |
| Medicago |
Medtr4g067160.1 |
528 |
90.7 |
93.9 |
| Serine/Threonine-kinase GCN2-like protein, putative | HC | chr4:25332191-25348227 | 20130731 |
| Soybean |
Glyma12g05640.1 |
550 |
92.8 |
96.4 |
|
| LJGI |
gnl|LJGI|TC69871 |
872 |
100.0 |
100.0 |
similar to UniRef100_A7QM66 Cluster: Chromosome chr5 scaffold_124, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_124, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3312860.3 |
length: 280 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Coil |
coil |
coiled-coil |
NA |
156-177 |
| Gene3D |
G3DSA:3.30.930.10 |
no description |
3e-25 |
14-271 |
| HMMPanther |
PTHR11042 |
EUKARYOTIC |
4.9e-126 |
1-234 |
| HMMPanther |
PTHR11042:SF9 |
EIF2ALPHA |
4.9e-126 |
1-234 |
| HMMPfam |
PF13393 |
tRNA-synt_His |
4e-14 |
53-274 |
| superfamily |
SSF55681 |
Class |
6.6e-21 |
10-274 |
- Wolf-PSORT
Lj3g3v3312860.3 cyto 4, mito 3.5, cyto_mito 2.5, cyto_plas 2.5, chlo 2, nucl 2, cyto_pero 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3312860.3 |
|